IL_6GZZ_106

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GCGAAGACAGC*GUCGAGU

Length

18 nucleotides

Bulged bases

6GZZ|1|A2|A|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|1090
6GZZ|1|A2|C|1091
6GZZ|1|A2|G|1092
6GZZ|1|A2|A|1093
6GZZ|1|A2|A|1094
6GZZ|1|A2|G|1095
6GZZ|1|A2|A|1096
6GZZ|1|A2|C|1097
6GZZ|1|A2|A|1098
6GZZ|1|A2|G|1099
6GZZ|1|A2|C|1100
*
6GZZ|1|A2|G|1155
6GZZ|1|A2|U|1156
6GZZ|1|A2|C|1157
6GZZ|1|A2|G|1158
6GZZ|1|A2|A|1159
6GZZ|1|A2|G|1160
6GZZ|1|A2|U|1161

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain G2

50S ribosomal protein L6