IL_6GZZ_144

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UUGAGG*CCAAGAUGAG

Length

16 nucleotides

Bulged bases

6GZZ|1|A2|G|2795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|U|2650
6GZZ|1|A2|U|2651
6GZZ|1|A2|G|2652
6GZZ|1|A2|A|2653
6GZZ|1|A2|G|2654
6GZZ|1|A2|G|2655
*
6GZZ|1|A2|C|2788
6GZZ|1|A2|C|2789
6GZZ|1|A2|A|2790
6GZZ|1|A2|A|2791
6GZZ|1|A2|G|2792
6GZZ|1|A2|A|2793
6GZZ|1|A2|U|2794
6GZZ|1|A2|G|2795
6GZZ|1|A2|A|2796
6GZZ|1|A2|G|2797

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain I2

50S ribosomal protein L13