IL_6GZZ_172
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GUGAAAGACC*GGGGGAGC
- Length
- 18 nucleotides
- Bulged bases
- 6GZZ|1|A3|A|590
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_172 not in the Motif Atlas
- Homologous match to IL_6CZR_138
- Geometric discrepancy: 0.5498
- The information below is about IL_6CZR_138
- Detailed Annotation
- tSH-tHW-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_57273.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6GZZ|1|A3|G|587
6GZZ|1|A3|U|588
6GZZ|1|A3|G|589
6GZZ|1|A3|A|590
6GZZ|1|A3|A|591
6GZZ|1|A3|A|592
6GZZ|1|A3|G|593
6GZZ|1|A3|A|594
6GZZ|1|A3|C|595
6GZZ|1|A3|C|596
*
6GZZ|1|A3|G|610
6GZZ|1|A3|G|611
6GZZ|1|A3|G|612
6GZZ|1|A3|G|613
6GZZ|1|A3|G|614
6GZZ|1|A3|A|615
6GZZ|1|A3|G|616
6GZZ|1|A3|C|617
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain D3
- 30S ribosomal protein S4
- Chain H3
- 30S ribosomal protein S8
- Chain P3
- 30S ribosomal protein S16
- Chain Q3
- 30S ribosomal protein S17
Coloring options: