3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
GUGGAAUUCC*GGAGGAACGCCGAUGGCGAAGGCAGC
Length
36 nucleotides
Bulged bases
6GZZ|1|A3|U|706
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A3|G|654
6GZZ|1|A3|U|655
6GZZ|1|A3|G|656
6GZZ|1|A3|G|657
6GZZ|1|A3|A|658
6GZZ|1|A3|A|659
6GZZ|1|A3|U|660
6GZZ|1|A3|U|661
6GZZ|1|A3|C|662
6GZZ|1|A3|C|663
*
6GZZ|1|A3|G|693
6GZZ|1|A3|G|694
6GZZ|1|A3|A|695
6GZZ|1|A3|G|696
6GZZ|1|A3|G|697
6GZZ|1|A3|A|698
6GZZ|1|A3|A|699
6GZZ|1|A3|C|700
6GZZ|1|A3|G|701
6GZZ|1|A3|C|702
6GZZ|1|A3|C|703
6GZZ|1|A3|G|704
6GZZ|1|A3|A|705
6GZZ|1|A3|U|706
6GZZ|1|A3|G|707
6GZZ|1|A3|G|708
6GZZ|1|A3|C|709
6GZZ|1|A3|G|710
6GZZ|1|A3|A|711
6GZZ|1|A3|A|712
6GZZ|1|A3|G|713
6GZZ|1|A3|G|714
6GZZ|1|A3|C|715
6GZZ|1|A3|A|716
6GZZ|1|A3|G|717
6GZZ|1|A3|C|718

Current chains

Chain A3
16S ribosomal RNA

Nearby chains

Chain C1
50S ribosomal protein L2
Chain F3
30S ribosomal protein S6
Chain K3
30S ribosomal protein S11
Chain O3
30S ribosomal protein S15
Chain R3
30S ribosomal protein S18
Chain V3
Ribosome hibernation promoting factor

Coloring options:

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