3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
CGGAUUGG*CCAUGAAG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A3|C|1284
6GZZ|1|A3|G|1285
6GZZ|1|A3|G|1286
6GZZ|1|A3|A|1287
6GZZ|1|A3|U|1288
6GZZ|1|A3|U|1289
6GZZ|1|A3|G|1290
6GZZ|1|A3|G|1291
*
6GZZ|1|A3|C|1308
6GZZ|1|A3|C|1309
6GZZ|1|A3|A|1310
6GZZ|1|A3|U|1311
6GZZ|1|A3|G|1312
6GZZ|1|A3|A|1313
6GZZ|1|A3|A|1314
6GZZ|1|A3|G|1315

Current chains

Chain A3
16S ribosomal RNA

Nearby chains

Chain M3
30S ribosomal protein S13
Chain S3
30S ribosomal protein S19
Chain U3
30S ribosomal protein Thx
Chain Z1
50S ribosomal protein L31

Coloring options:

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