IL_6GZZ_183

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGGAUUGG*CCAUGAAG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|C|1284
6GZZ|1|A3|G|1285
6GZZ|1|A3|G|1286
6GZZ|1|A3|A|1287
6GZZ|1|A3|U|1288
6GZZ|1|A3|U|1289
6GZZ|1|A3|G|1290
6GZZ|1|A3|G|1291
*
6GZZ|1|A3|C|1308
6GZZ|1|A3|C|1309
6GZZ|1|A3|A|1310
6GZZ|1|A3|U|1311
6GZZ|1|A3|G|1312
6GZZ|1|A3|A|1313
6GZZ|1|A3|A|1314
6GZZ|1|A3|G|1315

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain M3

30S ribosomal protein S13

Chain S3

30S ribosomal protein S19

Chain U3

30S ribosomal protein Thx

Chain Z1

50S ribosomal protein L31