IL_6GZZ_193

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UGACCUACCC*GAUGGG

Length

16 nucleotides

Bulged bases

6GZZ|1|A4|G|123, 6GZZ|1|A4|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A4|U|122
6GZZ|1|A4|G|123
6GZZ|1|A4|A|124
6GZZ|1|A4|C|125
6GZZ|1|A4|C|126
6GZZ|1|A4|U|127
6GZZ|1|A4|A|128
6GZZ|1|A4|C|129
6GZZ|1|A4|C|130
6GZZ|1|A4|C|131
*
6GZZ|1|A4|G|222
6GZZ|1|A4|A|223
6GZZ|1|A4|U|224
6GZZ|1|A4|G|225
6GZZ|1|A4|G|226
6GZZ|1|A4|G|227

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain P4

30S ribosomal protein S16

Chain Q4

30S ribosomal protein S17

Chain T4

30S ribosomal protein S20