IL_6GZZ_211

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGCC*GGUCAGC

Length

11 nucleotides

Bulged bases

6GZZ|1|A4|C|1181, 6GZZ|1|A4|A|1182

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A4|G|1039
6GZZ|1|A4|G|1040
6GZZ|1|A4|C|1041
6GZZ|1|A4|C|1042
*
6GZZ|1|A4|G|1178
6GZZ|1|A4|G|1179
6GZZ|1|A4|U|1180
6GZZ|1|A4|C|1181
6GZZ|1|A4|A|1182
6GZZ|1|A4|G|1183
6GZZ|1|A4|C|1184

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain C4

30S ribosomal protein S3

Chain J4

30S ribosomal protein S10

Chain N4

30S ribosomal protein S14 type Z

Chain V4

Ribosome hibernation promoting factor