IL_6GZZ_230

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CCCGG*CGG

Length

8 nucleotides

Bulged bases

6GZZ|1|A1|C|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|1869
6GZZ|1|A1|C|1870
6GZZ|1|A1|C|1871
6GZZ|1|A1|G|1872
6GZZ|1|A1|G|1873
*
6GZZ|1|A1|C|1926
6GZZ|1|A1|G|1927
6GZZ|1|A1|G|1928

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain A3

Small subunit ribosomal RNA; SSU rRNA

Chain C1

50S ribosomal protein L2