IL_6GZZ_263
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CCCAAAGGUCCCCUCAGG*CGGAGAGCG
- Length
- 27 nucleotides
- Bulged bases
- 6GZZ|1|A2|C|2299, 6GZZ|1|A2|A|2300, 6GZZ|1|A2|A|2302, 6GZZ|1|A2|G|2333
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A2|C|2297
6GZZ|1|A2|C|2298
6GZZ|1|A2|C|2299
6GZZ|1|A2|A|2300
6GZZ|1|A2|A|2301
6GZZ|1|A2|A|2302
6GZZ|1|A2|G|2303
6GZZ|1|A2|G|2304
6GZZ|1|A2|U|2305
6GZZ|1|A2|C|2306
6GZZ|1|A2|C|2307
6GZZ|1|A2|C|2308
6GZZ|1|A2|C|2309
6GZZ|1|A2|U|2310
6GZZ|1|A2|C|2311
6GZZ|1|A2|A|2312
6GZZ|1|A2|G|2313
6GZZ|1|A2|G|2314
*
6GZZ|1|A2|C|2331
6GZZ|1|A2|G|2332
6GZZ|1|A2|G|2333
6GZZ|1|A2|A|2334
6GZZ|1|A2|G|2335
6GZZ|1|A2|A|2336
6GZZ|1|A2|G|2337
6GZZ|1|A2|C|2338
6GZZ|1|A2|G|2339
Current chains
- Chain A2
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 5S ribosomal RNA; 5S rRNA
- Chain F2
- 50S ribosomal protein L5
- Chain N2
- 50S ribosomal protein L18
- Chain V2
- 50S ribosomal protein L27
- Chain b2
- 50S ribosomal protein L33
- Chain d2
- 50S ribosomal protein L35
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