IL_6GZZ_267

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GUUUCCCAG*CUGGGUAGC

Length

18 nucleotides

Bulged bases

6GZZ|1|A2|U|2703, 6GZZ|1|A2|C|2704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|2700
6GZZ|1|A2|U|2701
6GZZ|1|A2|U|2702
6GZZ|1|A2|U|2703
6GZZ|1|A2|C|2704
6GZZ|1|A2|C|2705
6GZZ|1|A2|C|2706
6GZZ|1|A2|A|2707
6GZZ|1|A2|G|2708
*
6GZZ|1|A2|C|2730
6GZZ|1|A2|U|2731
6GZZ|1|A2|G|2732
6GZZ|1|A2|G|2733
6GZZ|1|A2|G|2734
6GZZ|1|A2|U|2735
6GZZ|1|A2|A|2736
6GZZ|1|A2|G|2737
6GZZ|1|A2|C|2738

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain J2

50S ribosomal protein L14

Chain M2

50S ribosomal protein L17

Chain O2

50S ribosomal protein L19