IL_6GZZ_270

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGGGGUGUAAGCG*CGUUGAGCCGACC

Length

26 nucleotides

Bulged bases

6GZZ|1|A2|C|2886

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|2854
6GZZ|1|A2|G|2855
6GZZ|1|A2|G|2856
6GZZ|1|A2|G|2857
6GZZ|1|A2|G|2858
6GZZ|1|A2|U|2859
6GZZ|1|A2|G|2860
6GZZ|1|A2|U|2861
6GZZ|1|A2|A|2862
6GZZ|1|A2|A|2863
6GZZ|1|A2|G|2864
6GZZ|1|A2|C|2865
6GZZ|1|A2|G|2866
*
6GZZ|1|A2|C|2875
6GZZ|1|A2|G|2876
6GZZ|1|A2|U|2877
6GZZ|1|A2|U|2878
6GZZ|1|A2|G|2879
6GZZ|1|A2|A|2880
6GZZ|1|A2|G|2881
6GZZ|1|A2|C|2882
6GZZ|1|A2|C|2883
6GZZ|1|A2|G|2884
6GZZ|1|A2|A|2885
6GZZ|1|A2|C|2886
6GZZ|1|A2|C|2887

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain M2

50S ribosomal protein L17

Chain O2

50S ribosomal protein L19