IL_6GZZ_282

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CAUGUGAAAGACC*GGGGGAGCGUG

Length

24 nucleotides

Bulged bases

6GZZ|1|A3|G|613, 6GZZ|1|A3|G|614

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|C|584
6GZZ|1|A3|A|585
6GZZ|1|A3|U|586
6GZZ|1|A3|G|587
6GZZ|1|A3|U|588
6GZZ|1|A3|G|589
6GZZ|1|A3|A|590
6GZZ|1|A3|A|591
6GZZ|1|A3|A|592
6GZZ|1|A3|G|593
6GZZ|1|A3|A|594
6GZZ|1|A3|C|595
6GZZ|1|A3|C|596
*
6GZZ|1|A3|G|610
6GZZ|1|A3|G|611
6GZZ|1|A3|G|612
6GZZ|1|A3|G|613
6GZZ|1|A3|G|614
6GZZ|1|A3|A|615
6GZZ|1|A3|G|616
6GZZ|1|A3|C|617
6GZZ|1|A3|G|618
6GZZ|1|A3|U|619
6GZZ|1|A3|G|620

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain D3

30S ribosomal protein S4

Chain H3

30S ribosomal protein S8

Chain P3

30S ribosomal protein S16

Chain Q3

30S ribosomal protein S17