IL_6GZZ_283

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

ACGGUGGGAGAGGG*CCUGGUCCACCCGU

Length

28 nucleotides

Bulged bases

6GZZ|1|A3|A|648, 6GZZ|1|A3|C|731

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|A|638
6GZZ|1|A3|C|639
6GZZ|1|A3|G|640
6GZZ|1|A3|G|641
6GZZ|1|A3|U|642
6GZZ|1|A3|G|643
6GZZ|1|A3|G|644
6GZZ|1|A3|G|645
6GZZ|1|A3|A|646
6GZZ|1|A3|G|647
6GZZ|1|A3|A|648
6GZZ|1|A3|G|649
6GZZ|1|A3|G|650
6GZZ|1|A3|G|651
*
6GZZ|1|A3|C|721
6GZZ|1|A3|C|722
6GZZ|1|A3|U|723
6GZZ|1|A3|G|724
6GZZ|1|A3|G|725
6GZZ|1|A3|U|726
6GZZ|1|A3|C|727
6GZZ|1|A3|C|728
6GZZ|1|A3|A|729
6GZZ|1|A3|C|730
6GZZ|1|A3|C|731
6GZZ|1|A3|C|732
6GZZ|1|A3|G|733
6GZZ|1|A3|U|734

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain F3

30S ribosomal protein S6

Chain H3

30S ribosomal protein S8

Chain O3

30S ribosomal protein S15

Chain R3

30S ribosomal protein S18