3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
ACUACAAAGCG*CGCAAAAAGGU
Length
22 nucleotides
Bulged bases
6GZZ|1|A3|A|1267
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A3|A|1226
6GZZ|1|A3|C|1227
6GZZ|1|A3|U|1228
6GZZ|1|A3|A|1229
6GZZ|1|A3|C|1230
6GZZ|1|A3|A|1231
6GZZ|1|A3|A|1232
6GZZ|1|A3|A|1233
6GZZ|1|A3|G|1234
6GZZ|1|A3|C|1235
6GZZ|1|A3|G|1236
*
6GZZ|1|A3|C|1263
6GZZ|1|A3|G|1264
6GZZ|1|A3|C|1265
6GZZ|1|A3|A|1266
6GZZ|1|A3|A|1267
6GZZ|1|A3|A|1268
6GZZ|1|A3|A|1269
6GZZ|1|A3|A|1270
6GZZ|1|A3|G|1271
6GZZ|1|A3|G|1272
6GZZ|1|A3|U|1273

Current chains

Chain A3
16S ribosomal RNA

Nearby chains

Chain C3
30S ribosomal protein S3
Chain G3
30S ribosomal protein S7
Chain I3
30S ribosomal protein S9
Chain J3
30S ribosomal protein S10
Chain N3
30S ribosomal protein S14 type Z
Chain U3
30S ribosomal protein Thx

Coloring options:

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