3D structure

PDB id
6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
T. thermophilus hibernating 100S ribosome (amc)
Experimental method
ELECTRON MICROSCOPY
Resolution
4.13 Å

Loop

Sequence
GGACGAAACCC*GGACUGACGGUAC
Length
24 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6GZZ|1|A4|G|440
6GZZ|1|A4|G|441
6GZZ|1|A4|A|442
6GZZ|1|A4|C|443
6GZZ|1|A4|G|444
6GZZ|1|A4|A|445
6GZZ|1|A4|A|446
6GZZ|1|A4|A|447
6GZZ|1|A4|C|448
6GZZ|1|A4|C|449
6GZZ|1|A4|C|450
*
6GZZ|1|A4|G|460
6GZZ|1|A4|G|461
6GZZ|1|A4|A|462
6GZZ|1|A4|C|463
6GZZ|1|A4|U|464
6GZZ|1|A4|G|465
6GZZ|1|A4|A|466
6GZZ|1|A4|C|467
6GZZ|1|A4|G|468
6GZZ|1|A4|G|469
6GZZ|1|A4|U|470
6GZZ|1|A4|A|471
6GZZ|1|A4|C|472

Current chains

Chain A4
16S ribosomal RNA

Nearby chains

Chain D4
30S ribosomal protein S4
Chain P4
30S ribosomal protein S16

Coloring options:

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