IL_6GZZ_299

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGUGGGGAG*UCCACG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A4|C|753
6GZZ|1|A4|G|754
6GZZ|1|A4|U|755
6GZZ|1|A4|G|756
6GZZ|1|A4|G|757
6GZZ|1|A4|G|758
6GZZ|1|A4|G|759
6GZZ|1|A4|A|760
6GZZ|1|A4|G|761
*
6GZZ|1|A4|U|787
6GZZ|1|A4|C|788
6GZZ|1|A4|C|789
6GZZ|1|A4|A|790
6GZZ|1|A4|C|791
6GZZ|1|A4|G|792

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain C2

50S ribosomal protein L2

Chain K4

30S ribosomal protein S11

Chain O4

30S ribosomal protein S15