IL_6GZZ_300
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CAAACC*GGGUAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_300 not in the Motif Atlas
- Geometric match to IL_3LQX_002
- Geometric discrepancy: 0.3171
- The information below is about IL_3LQX_002
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6GZZ|1|A4|C|762
6GZZ|1|A4|A|763
6GZZ|1|A4|A|764
6GZZ|1|A4|A|765
6GZZ|1|A4|C|766
6GZZ|1|A4|C|767
*
6GZZ|1|A4|G|781
6GZZ|1|A4|G|782
6GZZ|1|A4|G|783
6GZZ|1|A4|U|784
6GZZ|1|A4|A|785
6GZZ|1|A4|G|786
Current chains
- Chain A4
- 16S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain K4
- 30S ribosomal protein S11
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