IL_6GZZ_333

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UGGG*CCCAAG

Length

10 nucleotides

Bulged bases

6GZZ|1|A2|A|2556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|U|2536
6GZZ|1|A2|G|2537
6GZZ|1|A2|G|2538
6GZZ|1|A2|G|2539
*
6GZZ|1|A2|C|2552
6GZZ|1|A2|C|2553
6GZZ|1|A2|C|2554
6GZZ|1|A2|A|2555
6GZZ|1|A2|A|2556
6GZZ|1|A2|G|2557

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain I2

50S ribosomal protein L13

Chain e2

50S ribosomal protein L36