IL_6GZZ_341
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- CGUG*CG
- Length
- 6 nucleotides
- Bulged bases
- 6GZZ|1|A3|U|65
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_341 not in the Motif Atlas
- Homologous match to IL_4LFB_005
- Geometric discrepancy: 0.3056
- The information below is about IL_4LFB_005
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.5
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 31
Unit IDs
6GZZ|1|A3|C|63
6GZZ|1|A3|G|64
6GZZ|1|A3|U|65
6GZZ|1|A3|G|66
*
6GZZ|1|A3|C|96
6GZZ|1|A3|G|97
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain T3
- 30S ribosomal protein S20
Coloring options: