IL_6GZZ_349

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGACAACCCGGG*CUCGGGCUAAUCC

Length

25 nucleotides

Bulged bases

6GZZ|1|A4|U|167

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A4|G|141
6GZZ|1|A4|G|142
6GZZ|1|A4|A|143
6GZZ|1|A4|C|144
6GZZ|1|A4|A|145
6GZZ|1|A4|A|146
6GZZ|1|A4|C|147
6GZZ|1|A4|C|148
6GZZ|1|A4|C|149
6GZZ|1|A4|G|150
6GZZ|1|A4|G|151
6GZZ|1|A4|G|152
*
6GZZ|1|A4|C|157
6GZZ|1|A4|U|158
6GZZ|1|A4|C|159
6GZZ|1|A4|G|160
6GZZ|1|A4|G|161
6GZZ|1|A4|G|162
6GZZ|1|A4|C|163
6GZZ|1|A4|U|164
6GZZ|1|A4|A|165
6GZZ|1|A4|A|166
6GZZ|1|A4|U|167
6GZZ|1|A4|C|168
6GZZ|1|A4|C|169

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain O2

50S ribosomal protein L19

Chain T4

30S ribosomal protein S20