IL_6H4N_038
3D structure
- PDB id
- 6H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAG*CGGC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6H4N_038 not in the Motif Atlas
- Homologous match to IL_5J7L_283
- Geometric discrepancy: 0.1594
- The information below is about IL_5J7L_283
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_73915.1
- Basepair signature
- cWW-L-R-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
6H4N|1|A|G|1038
6H4N|1|A|A|1039
6H4N|1|A|A|1040
6H4N|1|A|G|1041
*
6H4N|1|A|C|1114
6H4N|1|A|G|1115
6H4N|1|A|G|1116
6H4N|1|A|C|1117
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
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