IL_6H4N_172
3D structure
- PDB id
- 6H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6H4N_172 not in the Motif Atlas
- Homologous match to IL_4LFB_055
- Geometric discrepancy: 0.1083
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53985.1
- Basepair signature
- cWW-tSH-tSH-L-R-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
6H4N|1|a|C|1303
6H4N|1|a|G|1304
6H4N|1|a|G|1305
6H4N|1|a|A|1306
6H4N|1|a|U|1307
6H4N|1|a|U|1308
*
6H4N|1|a|A|1329
6H4N|1|a|U|1330
6H4N|1|a|G|1331
6H4N|1|a|A|1332
6H4N|1|a|A|1333
6H4N|1|a|G|1334
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S13
- Chain s
- 30S ribosomal protein S19
Coloring options: