IL_6H58_050

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

6H58|1|A|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6H58_050 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.3179

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

6H58|1|A|U|1415
6H58|1|A|G|1416
*
6H58|1|A|C|1582
6H58|1|A|A|1583
6H58|1|A|U|1584
6H58|1|A|C|1585
6H58|1|A|A|1586
6H58|1|A|G|1587

Current chains

Chain A

23S ribosomal RNA

Nearby chains