IL_6H58_121
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 6H58|1|AA|A|504, 6H58|1|AA|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6H58_121 not in the Motif Atlas
- Geometric match to IL_5J7L_255
- Geometric discrepancy: 0.087
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
6H58|1|AA|G|481
6H58|1|AA|A|482
6H58|1|AA|A|483
6H58|1|AA|C|484
*
6H58|1|AA|G|496
6H58|1|AA|A|497
6H58|1|AA|G|498
6H58|1|AA|U|499
6H58|1|AA|G|500
6H58|1|AA|A|501
6H58|1|AA|A|502
6H58|1|AA|A|503
6H58|1|AA|A|504
6H58|1|AA|A|505
6H58|1|AA|G|506
6H58|1|AA|A|507
6H58|1|AA|A|508
6H58|1|AA|C|509
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain SS
- 50S ribosomal protein L22
- Chain UU
- 50S ribosomal protein L24
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