IL_6H58_153

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

6H58|1|AA|A|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6H58_153 not in the Motif Atlas

Geometric match to IL_5J7L_287

Geometric discrepancy: 0.0964

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

6H58|1|AA|G|1202
6H58|1|AA|U|1203
6H58|1|AA|A|1204
6H58|1|AA|A|1205
6H58|1|AA|G|1206
*
6H58|1|AA|U|1240
6H58|1|AA|A|1241
6H58|1|AA|U|1242
6H58|1|AA|C|1243

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain EE

50S ribosomal protein L4

Chain LL

50S ribosomal protein L15