IL_6HA1_066
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 6HA1|1|A|G|1744
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HA1_066 not in the Motif Atlas
- Geometric match to IL_7RQB_068
- Geometric discrepancy: 0.0829
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6HA1|1|A|C|1731
6HA1|1|A|G|1732
6HA1|1|A|U|1733
6HA1|1|A|A|1734
6HA1|1|A|A|1735
6HA1|1|A|C|1736
*
6HA1|1|A|G|1741
6HA1|1|A|G|1742
6HA1|1|A|A|1743
6HA1|1|A|G|1744
6HA1|1|A|A|1745
6HA1|1|A|A|1746
6HA1|1|A|G|1747
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: