IL_6HA1_084

3D structure

PDB id

6HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGCUUGUACAGGAUAGG*CCCUGGCU

Length

25 nucleotides

Bulged bases

6HA1|1|A|G|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HA1|1|A|A|2134
6HA1|1|A|G|2135
6HA1|1|A|C|2136
6HA1|1|A|U|2137
6HA1|1|A|U|2138
6HA1|1|A|G|2139
6HA1|1|A|U|2140
6HA1|1|A|A|2141
6HA1|1|A|C|2142
6HA1|1|A|A|2143
6HA1|1|A|G|2144
6HA1|1|A|G|2145
6HA1|1|A|A|2146
6HA1|1|A|U|2147
6HA1|1|A|A|2148
6HA1|1|A|G|2149
6HA1|1|A|G|2150
*
6HA1|1|A|C|2206
6HA1|1|A|C|2207
6HA1|1|A|C|2208
6HA1|1|A|U|2209
6HA1|1|A|G|2210
6HA1|1|A|G|2211
6HA1|1|A|C|2212
6HA1|1|A|U|2213

Current chains

Chain A

23S ribosomal RNA

Nearby chains