IL_6HA1_193

3D structure

PDB id

6HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAAGAACAAG*CCUUGACGGUAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HA1|1|a|G|454
6HA1|1|a|G|455
6HA1|1|a|A|456
6HA1|1|a|A|457
6HA1|1|a|G|458
6HA1|1|a|A|459
6HA1|1|a|A|460
6HA1|1|a|C|461
6HA1|1|a|A|462
6HA1|1|a|A|463
6HA1|1|a|G|464
*
6HA1|1|a|C|486
6HA1|1|a|C|487
6HA1|1|a|U|488
6HA1|1|a|U|489
6HA1|1|a|G|490
6HA1|1|a|A|491
6HA1|1|a|C|492
6HA1|1|a|G|493
6HA1|1|a|G|494
6HA1|1|a|U|495
6HA1|1|a|A|496
6HA1|1|a|C|497

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16