IL_6HCF_174
3D structure
- PDB id
- 6HCF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGGGCAAGUC*GCUC
- Length
- 15 nucleotides
- Bulged bases
- 6HCF|1|A1|U|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCF|1|A1|G|598
6HCF|1|A1|A|599
6HCF|1|A1|G|600
6HCF|1|A1|G|601
6HCF|1|A1|G|602
6HCF|1|A1|C|603
6HCF|1|A1|A|604
6HCF|1|A1|A|605
6HCF|1|A1|G|606
6HCF|1|A1|U|607
6HCF|1|A1|C|608
*
6HCF|1|A1|G|635
6HCF|1|A1|C|636
6HCF|1|A1|U|637
6HCF|1|A1|C|638
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain D1
- uS5
- Chain E1
- uS3
- Chain K1
- Ribosomal protein S9 (Predicted)
- Chain Y1
- uS12
- Chain f1
- 40S ribosomal protein S30
- Chain w3
- mRNA
Coloring options: