IL_6HCF_263
3D structure
- PDB id
- 6HCF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUUG*CAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCF_263 not in the Motif Atlas
- Geometric match to IL_4V87_185
- Geometric discrepancy: 0.3192
- The information below is about IL_4V87_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09990.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6HCF|1|52|C|4294
6HCF|1|52|U|4295
6HCF|1|52|U|4296
6HCF|1|52|G|4297
*
6HCF|1|52|C|4314
6HCF|1|52|A|4315
6HCF|1|52|G|4316
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain D3
- 60S ribosomal protein L5
- Chain Q3
- eL18
- Chain T3
- eL21
- Chain b3
- eL29
- Chain o3
- eL42
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