IL_6HCF_284
3D structure
- PDB id
- 6HCF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUAUCAA*UGACCACGG
- Length
- 16 nucleotides
- Bulged bases
- 6HCF|1|A1|U|361, 6HCF|1|A1|C|399, 6HCF|1|A1|C|400
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCF|1|A1|C|358
6HCF|1|A1|U|359
6HCF|1|A1|A|360
6HCF|1|A1|U|361
6HCF|1|A1|C|362
6HCF|1|A1|A|363
6HCF|1|A1|A|364
*
6HCF|1|A1|U|396
6HCF|1|A1|G|397
6HCF|1|A1|A|398
6HCF|1|A1|C|399
6HCF|1|A1|C|400
6HCF|1|A1|A|401
6HCF|1|A1|C|402
6HCF|1|A1|G|403
6HCF|1|A1|G|404
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain 52
- Large subunit ribosomal RNA; LSU rRNA
- Chain J1
- eS8
- Chain M1
- Ribosomal protein S11
- Chain Y1
- uS12
Coloring options: