IL_6HCF_301
3D structure
- PDB id
- 6HCF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 6HCF|1|A1|U|1585, 6HCF|1|A1|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCF|1|A1|G|1541
6HCF|1|A1|C|1542
6HCF|1|A1|U|1543
6HCF|1|A1|C|1544
6HCF|1|A1|A|1545
6HCF|1|A1|G|1546
6HCF|1|A1|C|1547
6HCF|1|A1|G|1548
6HCF|1|A1|U|1549
6HCF|1|A1|G|1550
*
6HCF|1|A1|C|1582
6HCF|1|A1|C|1583
6HCF|1|A1|G|1584
6HCF|1|A1|U|1585
6HCF|1|A1|U|1586
6HCF|1|A1|G|1587
6HCF|1|A1|A|1588
6HCF|1|A1|A|1589
6HCF|1|A1|C|1590
6HCF|1|A1|C|1591
6HCF|1|A1|C|1592
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain E1
- uS3
- Chain G1
- Ribosomal protein S5
- Chain R1
- Ribosomal protein S16
- Chain U1
- eS19
- Chain V1
- uS10
- Chain a1
- eS25
- Chain e1
- uS14
Coloring options: