IL_6HCF_318
3D structure
- PDB id
- 6HCF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUGAACUA*UAGGGGCGAAAGACUAAUCGAAC
- Length
- 31 nucleotides
- Bulged bases
- 6HCF|1|52|A|1534, 6HCF|1|52|A|1630, 6HCF|1|52|A|1638
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCF|1|52|G|1530
6HCF|1|52|U|1531
6HCF|1|52|G|1532
6HCF|1|52|A|1533
6HCF|1|52|A|1534
6HCF|1|52|C|1535
6HCF|1|52|U|1536
6HCF|1|52|A|1537
*
6HCF|1|52|U|1622
6HCF|1|52|A|1623
6HCF|1|52|G|1624
6HCF|1|52|G|1625
6HCF|1|52|G|1626
6HCF|1|52|G|1627
6HCF|1|52|C|1628
6HCF|1|52|G|1629
6HCF|1|52|A|1630
6HCF|1|52|A|1631
6HCF|1|52|A|1632
6HCF|1|52|G|1633
6HCF|1|52|A|1634
6HCF|1|52|C|1635
6HCF|1|52|U|1636
6HCF|1|52|A|1637
6HCF|1|52|A|1638
6HCF|1|52|U|1639
6HCF|1|52|C|1640
6HCF|1|52|G|1641
6HCF|1|52|A|1642
6HCF|1|52|A|1643
6HCF|1|52|C|1644
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A3
- Ribosomal protein L8
- Chain C3
- uL4
- Chain N3
- Ribosomal protein L15
- Chain P3
- uL22
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
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