IL_6HCJ_007

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CACUCCC*GGCCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|C|168
6HCJ|1|51|A|169
6HCJ|1|51|C|170
6HCJ|1|51|U|171
6HCJ|1|51|C|172
6HCJ|1|51|C|173
6HCJ|1|51|C|174
*
6HCJ|1|51|G|262
6HCJ|1|51|G|263
6HCJ|1|51|C|264
6HCJ|1|51|C|265
6HCJ|1|51|C|266
6HCJ|1|51|G|267

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain L3

eL13

Chain h3

uL29