3D structure

PDB id
6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAUCCC*GGGCGCAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HCJ|1|51|G|1425
6HCJ|1|51|G|1426
6HCJ|1|51|A|1427
6HCJ|1|51|U|1428
6HCJ|1|51|C|1429
6HCJ|1|51|C|1430
6HCJ|1|51|C|1431
*
6HCJ|1|51|G|1453
6HCJ|1|51|G|1454
6HCJ|1|51|G|1455
6HCJ|1|51|C|1456
6HCJ|1|51|G|1457
6HCJ|1|51|C|1458
6HCJ|1|51|A|1459
6HCJ|1|51|C|1460

Current chains

Chain 51
28S ribosomal RNA

Nearby chains

Chain Q3
eL18
Chain b3
eL29

Coloring options:

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