IL_6HCJ_072

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUGAAC*GAACA

Length

12 nucleotides

Bulged bases

6HCJ|1|51|A|2428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|U|2413
6HCJ|1|51|G|2414
6HCJ|1|51|U|2415
6HCJ|1|51|G|2416
6HCJ|1|51|A|2417
6HCJ|1|51|A|2418
6HCJ|1|51|C|2419
*
6HCJ|1|51|G|2427
6HCJ|1|51|A|2428
6HCJ|1|51|A|2429
6HCJ|1|51|C|2430
6HCJ|1|51|A|2431

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 1

nascent chain

Chain P3

uL22

Chain R3

eL19

Chain l3

eL39