IL_6HCJ_096

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAGG*CCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|G|3970
6HCJ|1|51|G|3971
6HCJ|1|51|A|3972
6HCJ|1|51|G|3973
6HCJ|1|51|G|3974
*
6HCJ|1|51|C|4037
6HCJ|1|51|C|4038
6HCJ|1|51|G|4039
6HCJ|1|51|C|4040
6HCJ|1|51|C|4041
6HCJ|1|51|G|4042
6HCJ|1|51|G|4043
6HCJ|1|51|U|4044
6HCJ|1|51|G|4045
6HCJ|1|51|A|4046
6HCJ|1|51|A|4047
6HCJ|1|51|A|4048
6HCJ|1|51|U|4049
6HCJ|1|51|A|4050
6HCJ|1|51|C|4051

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain 33

Transfer RNA; tRNA

Chain a2

eS25

Chain w3

uL1