IL_6HCJ_120

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAUUAU*AGAAUCC

Length

14 nucleotides

Bulged bases

6HCJ|1|51|A|4708

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|G|4679
6HCJ|1|51|G|4680
6HCJ|1|51|A|4681
6HCJ|1|51|U|4682
6HCJ|1|51|U|4683
6HCJ|1|51|A|4684
6HCJ|1|51|U|4685
*
6HCJ|1|51|A|4705
6HCJ|1|51|G|4706
6HCJ|1|51|A|4707
6HCJ|1|51|A|4708
6HCJ|1|51|U|4709
6HCJ|1|51|C|4710
6HCJ|1|51|C|4711

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain H3

uL6

Chain O3

uL13

Chain m3

eL40