IL_6HCJ_129

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6HCJ|1|51|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|G|5012
6HCJ|1|51|C|5013
6HCJ|1|51|A|5014
6HCJ|1|51|G|5015
6HCJ|1|51|A|5016
6HCJ|1|51|G|5017
*
6HCJ|1|51|C|5032
6HCJ|1|51|G|5033
6HCJ|1|51|A|5034
6HCJ|1|51|U|5035
6HCJ|1|51|C|5036

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain J2

eS8

Chain R3

eL19

Chain U3

eL22