IL_6HCJ_243
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCGCCCUGGAAUG*CGAGAGAGGGGC
- Length
- 25 nucleotides
- Bulged bases
- 6HCJ|1|51|G|2652, 6HCJ|1|51|U|2661, 6HCJ|1|51|A|2674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|G|2650
6HCJ|1|51|C|2651
6HCJ|1|51|G|2652
6HCJ|1|51|C|2653
6HCJ|1|51|C|2654
6HCJ|1|51|C|2655
6HCJ|1|51|U|2656
6HCJ|1|51|G|2657
6HCJ|1|51|G|2658
6HCJ|1|51|A|2659
6HCJ|1|51|A|2660
6HCJ|1|51|U|2661
6HCJ|1|51|G|2662
*
6HCJ|1|51|C|2672
6HCJ|1|51|G|2673
6HCJ|1|51|A|2674
6HCJ|1|51|G|2675
6HCJ|1|51|A|2676
6HCJ|1|51|G|2677
6HCJ|1|51|A|2678
6HCJ|1|51|G|2679
6HCJ|1|51|G|2680
6HCJ|1|51|G|2681
6HCJ|1|51|G|2682
6HCJ|1|51|C|2683
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain O2
- uS15
- Chain R3
- eL19
- Chain Z3
- 60S ribosomal protein L27
- Chain c3
- eL30
- Chain g3
- eL34
- Chain p3
- eL43
Coloring options: