IL_6HCJ_254

3D structure

PDB id

6HCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAUCUUG*CAGAC

Length

12 nucleotides

Bulged bases

6HCJ|1|51|A|4292

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCJ|1|51|G|4291
6HCJ|1|51|A|4292
6HCJ|1|51|U|4293
6HCJ|1|51|C|4294
6HCJ|1|51|U|4295
6HCJ|1|51|U|4296
6HCJ|1|51|G|4297
*
6HCJ|1|51|C|4314
6HCJ|1|51|A|4315
6HCJ|1|51|G|4316
6HCJ|1|51|A|4317
6HCJ|1|51|C|4318

Current chains

Chain 51

28S ribosomal RNA

Nearby chains

Chain D3

60S ribosomal protein L5

Chain Q3

eL18

Chain T3

eL21

Chain b3

eL29

Chain o3

eL42