IL_6HCJ_282
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGACGGCCGGGGGCA*UGCCAAGAAUGUUUU
- Length
- 30 nucleotides
- Bulged bases
- 6HCJ|1|A2|G|933, 6HCJ|1|A2|U|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|A2|G|924
6HCJ|1|A2|G|925
6HCJ|1|A2|A|926
6HCJ|1|A2|C|927
6HCJ|1|A2|G|928
6HCJ|1|A2|G|929
6HCJ|1|A2|C|930
6HCJ|1|A2|C|931
6HCJ|1|A2|G|932
6HCJ|1|A2|G|933
6HCJ|1|A2|G|934
6HCJ|1|A2|G|935
6HCJ|1|A2|G|936
6HCJ|1|A2|C|937
6HCJ|1|A2|A|938
*
6HCJ|1|A2|U|1004
6HCJ|1|A2|G|1005
6HCJ|1|A2|C|1006
6HCJ|1|A2|C|1007
6HCJ|1|A2|A|1008
6HCJ|1|A2|A|1009
6HCJ|1|A2|G|1010
6HCJ|1|A2|A|1011
6HCJ|1|A2|A|1012
6HCJ|1|A2|U|1013
6HCJ|1|A2|G|1014
6HCJ|1|A2|U|1015
6HCJ|1|A2|U|1016
6HCJ|1|A2|U|1017
6HCJ|1|A2|U|1018
Current chains
- Chain A2
- 18S ribosomal RNA
Nearby chains
- Chain C2
- 40S ribosomal protein S3a
- Chain O2
- uS15
- Chain b2
- eS26
- Chain c2
- 40S ribosomal protein S27
- Chain c3
- eL30
- Chain p3
- eL43
Coloring options: