IL_6HCJ_314
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUAAGGCG*CGCUGGAGCGUCGGGCCCAUA
- Length
- 29 nucleotides
- Bulged bases
- 6HCJ|1|51|U|2054, 6HCJ|1|51|G|2055, 6HCJ|1|51|U|2070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6HCJ|1|51|U|1905
6HCJ|1|51|U|1906
6HCJ|1|51|A|1907
6HCJ|1|51|A|1908
6HCJ|1|51|G|1909
6HCJ|1|51|G|1910
6HCJ|1|51|C|1911
6HCJ|1|51|G|1912
*
6HCJ|1|51|C|2051
6HCJ|1|51|G|2052
6HCJ|1|51|C|2053
6HCJ|1|51|U|2054
6HCJ|1|51|G|2055
6HCJ|1|51|G|2056
6HCJ|1|51|A|2057
6HCJ|1|51|G|2058
6HCJ|1|51|C|2059
6HCJ|1|51|G|2060
6HCJ|1|51|U|2061
6HCJ|1|51|C|2062
6HCJ|1|51|G|2063
6HCJ|1|51|G|2064
6HCJ|1|51|G|2065
6HCJ|1|51|C|2066
6HCJ|1|51|C|2067
6HCJ|1|51|C|2068
6HCJ|1|51|A|2069
6HCJ|1|51|U|2070
6HCJ|1|51|A|2071
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 71
- 5S ribosomal RNA; 5S rRNA
- Chain F3
- uL30
- Chain H3
- uL6
- Chain M3
- Ribosomal protein L14
- Chain O3
- uL13
- Chain Q3
- eL18
- Chain S3
- eL20
- Chain e3
- eL32
- Chain f3
- eL33
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