IL_6HCM_033
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CUC*GCCCG
- Length
- 8 nucleotides
- Bulged bases
- 6HCM|1|52|C|1214, 6HCM|1|52|C|1215
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCM_033 not in the Motif Atlas
- Geometric match to IL_7A0S_030
- Geometric discrepancy: 0.3067
- The information below is about IL_7A0S_030
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
6HCM|1|52|C|1082
6HCM|1|52|U|1083
6HCM|1|52|C|1084
*
6HCM|1|52|G|1213
6HCM|1|52|C|1214
6HCM|1|52|C|1215
6HCM|1|52|C|1216
6HCM|1|52|G|1217
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain F3
- uL30
- Chain b3
- eL29
Coloring options: