IL_6HCM_099

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CUAG*UGGGG

Length

9 nucleotides

Bulged bases

6HCM|1|52|G|4183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|3926
6HCM|1|52|U|3927
6HCM|1|52|A|3928
6HCM|1|52|G|3929
*
6HCM|1|52|U|4181
6HCM|1|52|G|4182
6HCM|1|52|G|4183
6HCM|1|52|G|4184
6HCM|1|52|G|4185

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain A3

Ribosomal protein L8

Chain N3

Ribosomal protein L15

Chain o3

eL42