IL_6HCM_111

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GGCUUGUGG*CUUUUUGAUCC

Length

20 nucleotides

Bulged bases

6HCM|1|52|U|4437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|4400
6HCM|1|52|G|4401
6HCM|1|52|C|4402
6HCM|1|52|U|4403
6HCM|1|52|U|4404
6HCM|1|52|G|4405
6HCM|1|52|U|4406
6HCM|1|52|G|4407
6HCM|1|52|G|4408
*
6HCM|1|52|C|4434
6HCM|1|52|U|4435
6HCM|1|52|U|4436
6HCM|1|52|U|4437
6HCM|1|52|U|4438
6HCM|1|52|U|4439
6HCM|1|52|G|4440
6HCM|1|52|A|4441
6HCM|1|52|U|4442
6HCM|1|52|C|4443
6HCM|1|52|C|4444

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain I3

60S ribosomal protein L10

Chain b3

eL29

Chain j1

eRF1(AAQ)