IL_6HCM_116

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|C|4466
6HCM|1|52|A|4467
6HCM|1|52|U|4468
6HCM|1|52|U|4469
6HCM|1|52|G|4470
*
6HCM|1|52|C|4485
6HCM|1|52|C|4486
6HCM|1|52|A|4487
6HCM|1|52|A|4488
6HCM|1|52|G|4489
6HCM|1|52|C|4490
6HCM|1|52|G|4491

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain H3

uL6

Chain O3

uL13

Chain V3

Ribosomal protein L23

Chain m3

eL40