IL_6HCM_126

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GUGCUU*AAUGGGGC

Length

14 nucleotides

Bulged bases

6HCM|1|52|A|4656, 6HCM|1|52|U|4657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|52|G|4637
6HCM|1|52|U|4638
6HCM|1|52|G|4639
6HCM|1|52|C|4640
6HCM|1|52|U|4641
6HCM|1|52|U|4642
*
6HCM|1|52|A|4655
6HCM|1|52|A|4656
6HCM|1|52|U|4657
6HCM|1|52|G|4658
6HCM|1|52|G|4659
6HCM|1|52|G|4660
6HCM|1|52|G|4661
6HCM|1|52|C|4662

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain R3

eL19

Chain W3

eL24

Chain d3

eL31