3D structure

PDB id
6HCM (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the rabbit collided di-ribosome (stalled monosome)
Experimental method
ELECTRON MICROSCOPY
Resolution
6.8 Å

Loop

Sequence
GUGCUU*AAUGGGGC
Length
14 nucleotides
Bulged bases
6HCM|1|52|A|4656, 6HCM|1|52|U|4657
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HCM|1|52|G|4637
6HCM|1|52|U|4638
6HCM|1|52|G|4639
6HCM|1|52|C|4640
6HCM|1|52|U|4641
6HCM|1|52|U|4642
*
6HCM|1|52|A|4655
6HCM|1|52|A|4656
6HCM|1|52|U|4657
6HCM|1|52|G|4658
6HCM|1|52|G|4659
6HCM|1|52|G|4660
6HCM|1|52|G|4661
6HCM|1|52|C|4662

Current chains

Chain 52
28S ribosomal RNA

Nearby chains

Chain R3
eL19
Chain W3
eL24
Chain d3
eL31

Coloring options:

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