IL_6HCM_150
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- UACGCAC*GUGAAA
- Length
- 13 nucleotides
- Bulged bases
- 6HCM|1|A1|C|65, 6HCM|1|A1|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCM_150 not in the Motif Atlas
- Geometric match to IL_1M5K_001
- Geometric discrepancy: 0.2952
- The information below is about IL_1M5K_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80926.1
- Basepair signature
- cWW-cWW-tSH-tHS-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6HCM|1|A1|U|63
6HCM|1|A1|A|64
6HCM|1|A1|C|65
6HCM|1|A1|G|66
6HCM|1|A1|C|67
6HCM|1|A1|A|68
6HCM|1|A1|C|69
*
6HCM|1|A1|G|80
6HCM|1|A1|U|81
6HCM|1|A1|G|82
6HCM|1|A1|A|83
6HCM|1|A1|A|84
6HCM|1|A1|A|85
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain H1
- 40S ribosomal protein S6
- Chain W3
- eL24
- Chain Z1
- eS24
Coloring options: