IL_6HCM_155

3D structure

PDB id

6HCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (stalled monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

UGGAUAAC*GCUAAUACA

Length

17 nucleotides

Bulged bases

6HCM|1|A1|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCM|1|A1|U|144
6HCM|1|A1|G|145
6HCM|1|A1|G|146
6HCM|1|A1|A|147
6HCM|1|A1|U|148
6HCM|1|A1|A|149
6HCM|1|A1|A|150
6HCM|1|A1|C|151
*
6HCM|1|A1|G|167
6HCM|1|A1|C|168
6HCM|1|A1|U|169
6HCM|1|A1|A|170
6HCM|1|A1|A|171
6HCM|1|A1|U|172
6HCM|1|A1|A|173
6HCM|1|A1|C|174
6HCM|1|A1|A|175

Current chains

Chain A1

18S ribosomal RNA

Nearby chains

Chain H1

40S ribosomal protein S6

Chain W3

eL24

Chain Z1

eS24